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DNA BASER sequence aligner


dna sequence assembly software

DNA Baser sequence aligner is an easy to use software package providing DNA sequence assembly functions (simple and batch), contig editing functions and chromatogram viewer/editor. We have created a fast assembly engine and a range of features that greatly speed up the process of sequence assembly and mutation analysis.

It provides automated end trimming (clipping), so there is no need to trim manually the low quality bases from the ends of the trace files before contig assembly. This saves considerable time, especially when assembling many DNA sequences.

DNA BASER sequence aligner offers a smart navigation system that takes you to the location of each sequence ambiguity / mutation with only a single click. Our proprietary sequencing error correction algorithm provides further timesaving.

The truly user-friendly interface makes DNA Baser sequence aligner the best choice for DNA contig assembly. For more details, see the DNA BASER Features page.

This sequence aligner is ideal for assembly of all sequence types, including the SSU rRNA genes (16S and 18S rRNA), LSU rRNA genes (23S and 28S rRNA), protein genes, and/or genomic fragments.

DNA BASER sequence aligner is a valuable tool for studies of biodiversity, molecular ecology, sequencing of various functional and structural genes, or any application that is involved in the cloning and sequencing of DNA. It can read sequences in either TXT, FASTA, SEQ, ABI, or SCF file format.

The DNA BASER sequence aligner package is offered at a very affordable price ($299 for Student license/ $599 for Academic/ $699 for business), making it an ideal for universities, research institutions, or private companies performing DNA sequencing. Discounts apply if you purchase more than one license.

Starting with version 2.7, DNA Baser sequence aligner can assemble contigs in batch mode. Now you can assemble all your sequences at once. Just define a pattern, press the start button and you are done. At the moment DNA Baser is the only software on the market who offers batch contig assembly. Another new feature in version 2.7 is 'Assemble to reference'.

DNA contig assembly software


If you want to try it, you can download and install it in less than one minute.
No personal data or registration process is required. The trial version is fully functional!



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How to make a contig in 5 seconds
5 seconds
(click to enlarge)

 
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